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Species belonging to selected taxon:

Populus tremula x Populus tremuloides



ABOUT THIS RECORD

ID: MNEST002185
species: Populus tremula x Populus tremuloides
miRNA family: MIRf35
source: miRNEST

Taxonomy by NCBI:
Populus tremula x Populus tremuloides Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACATTGTTGCCCGAGAAGACC

miRNA*
GCTTCTAGGGTGATGAATCA

mismatches: 5
bulges: 1

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pre-miRNA
TTAAAACTAGATTTCCTCACTTGCTTCTAGGGTGATGAATCATGATGCCGATAATTAAGGATGACATTGTTGCCCGAGAAGACCTTGGAGTTCCTGTATT
TAT


dot-bracket secondary structure
.....((..((.((((.......(((((.(((((((((.((((....((.........))))))..))))))))).))))).....)))).))..))...
...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





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